Dataset for CDS classical BH3-containing proteins of organism Salmo trutta

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                           *                                    
atg--gacgatacgc--atgat-----------------tgtgTggatga------------------------------
tccaatttccctaataa-gagagaaggctattagtgcaagcgc cttcctccatctttccctctcctctctctccctctc
caa  ccat  gttg  c--tcc  caaa cc c c   ca    cg  gtgtca                         
        a         c                           c    ac                           
                  a                                                             

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
ctctctctctccctctcctctctcccccctcctctccctctcctctctcctctctcgccctctccgccttcctctgcctc
                                                                                
                                                                                
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
---------------------------------------------------------------g----------------
tctctctctctgcctctccttgatcctctcctctcctctgcctctctccctcctcgctctcat-gctgacgctctcctct
                  acgccgag                                   tg ca ct           
                   a a c a                                      a  a            
                       a                                                        

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                            *  *     *                          
----------------------------------------cggaGagTctgatCactgcgg-------------------
ctctcctctcctctctctcctccctctcctctctctcacaatct cc -gccc ctgctttcggagctgcctccggtgcc
                                     tttgca   a t--       ac       a      c     
                                      ag         ct                             
                                                  a                             

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
       *                                                                        
--acccaCag----------------------------------------------------------------------
gagaggt tcacaaccccctcctctctctctctccctctcctctccctctcctctctctctccctctcctctctctctcc
  ct      t tc   t                                                              
                                                                                
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
tctccccagtcctgcgaaggggaccagcagtcactgggaggaatcctttccctctcctctctctccccctctcctctctc
       tc t ac tctcttct  ct tc  t g cctctcc                                     
                  a                                                             
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
tctccctctcctctccctctcctctctctcctccctctcctctctctctccctctcctctctctctccctctcctctctc
                                                                                
                                                                                
                                                                                

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
tctccctctcctctctctgcctctcctcctttccctctccctctctctctcccttacctctctctctttctctgcctctt
                                                      ct                        
                                                                                
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
ttctctctctttgcctcttttctctctctctgcctcacctcctgtctctctctctctctcctcacgtctctttcccccct
                                                                                
                                                                                
                                                                                

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
---------------------------actacaccgaa-attcagctcga-----------t--tgactcgag-------
ttccgctctctatctcgctcccctctcctgtttggcctttgaatctatcgtctcactgctt-ttgctgagcgctcctcac
                           t ac g a  g c   c                  cac  t  ac        
                                c                                               
                                                                                

       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                       *      **  *             
-------------------------------------------------gacgccGaggctcAGacC-ac-gac-----c
ttcctcttcctctgtagatgtcagcatggctcagatgtttactatatcattgcat ttctcg  ca ttgtttgtggcag
                                                 c  aga gcaaa       ca cc   c   
                                                 a        t                     
                                                                                

       890       900       910       920       930       940       950       960
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
 *                                                                             *
aGgtcagc-gagtg--------cggct----------------------------------------------------C
t ccggttgctaacgatattttttatcaggaccaatcgtctgccggaaaggggatgactggcggtccaataggccacac 
  a acaaaac            c aa                                                     
                                                                                
                                                                                

       970       980       990      1000      1010      1020      1030      1040
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
      *   *                                                                  *  
tacagcGagtCccagg------tgtgc---------------------------------------------tcccaGgt
ggttcg ttg tattctgagaccaccaagaccactcttctacggcaacgcaggctttcgattgcactttccaggagc tg
ct g t   c  g  a      a a                                           c     g g 
     a                  g                                                       
                                                                                

      1050      1060      1070      1080      1090      1100      1110      1120
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                   **   *       *                                               
tggg--agaag---ggtagACacaGagtctcaG-------------------------------gagcagatg-ctccag
attcaacagttacatagca  cag gcctcgt cccatctagccaagtcattactcacgcactgcgtgtcc--t----ta
 ca   tttga   a ag   t                             g  c          cc g ga a   g--
                                                                  a          a t
                                                                                

      1130      1140      1150      1160      1170      1180      1190      1200
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
    ** *                          *     *                                       
c-gaGGaGagcgg-ggg----------------tGatgggGct-----------------ccat-------------tcc
-tct  g gctaagtcatggaaggcgtgcccaca gatat gaaaggcacacgtgtggcctatccccctccggccctata
gatg                             c  caca a           c       ---       ac    ---
 ga                                                                          cag
                                                                                

      1210      1220      1230      1240      1250      1260      1270      1280
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
           *   *                 *  * *                  * **       **  * **  * 
gagcccgatcaCagcCagctcc-gcggcactgtGggCtGcaatga-atatggtcagcAgCTccagcgcATggGaGAtgAg
---gtaccg-- cat tatgg-tcgtaactgca at a agtaagt------ctgcg a  tagaatg  ta t  cc a
cgt a  gc c     g  c  gaaa   aa c  c    c c cagatc  a   a    g                
  c                a  c                      gc     g                           
  a                   a                                                         

      1290      1300      1310      1320      1330      1340      1350      1360
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
**         *              *                  *   *           *  *               
TT-------taAcaccttcc-tctacAt---cgccgagc----ccAaacGagcaagtagccCagGaggaggcgca-----
  ctaccaagg tgagcggatcgggt aaggaaggttaatggttg ggg gtggttatttg tt taatcctaaggcaga
   c           t   g aa                a aag    a  at gagg    ga g cg t   c   c 
                                           a                                    
                                                                                

      1370      1380      1390      1400      1410      1420      1430      1440
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
              *           *               *            *                      * 
------------caGcctt---tctcCtgtggatggtgctctTtcct---c-aggAgtccaaagc--------agactGa
tgcaccaagagctg aaggccacgct ccctcccccgtgggc ggtgggaggtct tgaattctgtggagggggtgga -
             c gtac   a  a   aa    a    t  aaa       tc      g aa    a     c g c
                  a   g                                                         
                                                                                

      1450      1460      1470      1480   
....:....|....:....|....:....|....:....|...
                                        *  
ag------------------------------ggaggaggTga
-ccagaacatacccctaccatcccaccacgatcctcagaa ag
ga                              aa  t      
                                           
                                           
© 1998-2024Centre National de la Recherche Scientifique logoInstitut national de la sante et de la recherche médicale logoUniversité de Lyon logoLegal notice