Dataset for CDS BID-like of organism Sarcophilus harrisii

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
***                                     *                                       
ATGga-tcag------------------tttaa---acaaAcaa------------------------------------
   ttcaacagtccttggcattttcatagacggtagcagg gcgtaatcccctggtgctggacttttgtggaactttgcc
   a  g  t                      cgga                                            
                                                                                

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
agctaatctaatggcatcttctgttgctgtgcctataggatttcattatgaaacaaaatatgttgttctcagttacctgg
                                                                                
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                              *  *    *     *   
-----------------------------------------------------gtttggtgcTgtAc-aaCtttctAc--
gactcctttcaagggagaagccccaacaacaggatcctttctcaactcaaggcagggacgtt tg atct cgcta aca
                                                       cccaccg     c  c gc    
                                                        a    a                  

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  *  *   *     *          *                                                     
agAgtTcctGtagcaActtttgccaaAc--------ggagctaa-g---ctg-a--gtgagctggctg----t--c-cca
ta ac ttg atagc tcaaatattg aattgaata--------a-gag---g-ca------------tgtt-gg-t---
        a  cta  ag    g g    ca   g ca  g gcg tct   a tgca cttcttta aagc tt a   
                                    a     c             a   aa c                

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
g-a--ggct-t------caggcctatgtg--ctgcaa------------acagatggcaatcggt---------------
-g-at----g-tcggag----a-----a-gt------ccctgttacccc--------------aagactgcttggcccaa
 c ca    t gactgc  ta-tgc  -c  actg c            tgt ggcttg gac--               
                   c  a     a    a                                              

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
attggacagaagatgtcactggaactgaaagaacacatgcatgaagcattgcagactctggtctttgagccattgagcta
                                                            c aagcc             
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
tcaggcatatcgggaatgtacactggacactgcagctcttgccggcggctggaataaggttttggtgcctctgattctac
                                                                                
                                                                                

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                *  * ***  *  *  
--------------------------------------------------------------gcTgtTtTGAcgTgtCta
tacagcaaatactgatggagttgacaagacgaggacaggatccccttagttcattgatagagtt ag g   ta aa cg
                                                                            
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                      *     *                                                   
ga--------------------GggtcgTg--------------------------------------------------
tcattgctgcccgactaagaat aagaa tctgcaaattatataattcagcaaggcggatggggcactgtctttaatctg
                       ctag                                                     
                                                                                

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
   ****         *    * ** ***    * * *             * *      *       **     *    
--gTCAGattaagaaaAccatGgAAtTAT-gcaGaGgAtagcgataaaattTgCc--caaAtcggtgaCAatataGcgag
gac    tagcgtggg aaca a  a   tctg c c ct--agcgctccc a attatg caatgat  cctct aaca
  a      a                    a     a g     a                    c       a  tt c
                                                                                

       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
       *       *  *         **    *                                             
tatcatgCag--gcaAtcTtggtgtatgACctgaTcctggcgttcagaattctt-------tctctgt------------
gggagcc ctcccgc g- ccaacggca  aact --a-caag------aga--acctgttaa-----cagcaagccaga
  c  aa            c tc  t   ga    - ----      ---         --                 
                                                                                

       890       900       910       920       930       940       950       960
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                             *  
------------------------------------------------------------------ctgctgaggacAag
gctggcatacagaaaacttaccagtgtccttggggcctgagtcctggcaacagatcgctatggatc-a-aa----tt gt
                                                                   - --         
                                                                                

       970       980       990      1000      1010      1020      1030      1040
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*      *     *      *  *  * * *    **    ***    **        *  * *   * * *  *     
AgtatatAcagtgAtggtgcTgtGcaAgAaAtga-TGcgaaCAAttctTCtg-----gAtcTtGtgcAtGaGaaGgctga
 agtgcg tctga aaccag ag gc c c gagg  aacc   ca-c  caattcta ca a act a t gg aaact
  a             t    ca              t      g  -   t                         ct 
                                                                                

      1050      1060      1070      1080      1090      1100      1110      1120
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
        *                                                                       
att---atTgcc--------------------------------------------------------------------
tgaggcta attagaggggatagaagggatagtgtcagctcctctggtactacaggtacaagaagggtttcagggtaccc
 c     g                                                                        
                                                                                

      1130      1140      1150      1160      1170      1180      1190      1200
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                              *  ***  ***       
-----------------------------------------------------------gggAatGCTgcTGGtta----
ccaccctcttgctttcagataccactgccacttccttgttagagatggaacaggtcacaaac ca   at   cggtcgt
                                                           t t           a      
                                                                                

      1210      1220      1230      1240      1250      1260      1270      1280
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     * **           ** *    *          *                                        
----aAaAAgtta--acccaTGcCccatCtttgtt-tggA----------------------------------------
ttccc c  ca--tgtgagc  g aagg cgcaagccct gaacttgaagaagaggagatcagagcagcaaaggagaagt
             cc              a  t                                               
                                                                                

      1290      1300      1310      1320      1330      1340      1350      1360
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                 * *     * **   *       **    *                 
-------------------------------gcCaTcttttAtATcacCgtcgattAC--atGaatgggtacctc---ct
cggttggacagcagttccccaagccacgtcaag t gaggg c  gga caaccaa  tggc gcgcataga--acccaa
                               c        a      t a t  gg           t c    -   --
                                                                                

      1370      1380      1390      1400      1410      1420      1430      1440
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                     ***                                                        
tagctgcataaggtacttggtCAGgagtg---------------------------------------------------
g-c--aa-g--aaa---gcc-   atagtagagcgaaaaataaaggagagcctttccgaagccacatcccctgctgcaga
- -  -- -  ---   ---    t ta                                                    
                                                                                

      1450      1460      1470      1480      1490      1500      1510      1520
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------tgatggccgtgg
agagaagcacattttgttaccagagggcaaatctatcctgctttatggtggtgctgctgctgtcgccaattgtt-aag--
                                                                     a a  g---  
                                                                                

      1530      1540      1550      1560      1570      
....:....|....:....|....:....|....:....|....:....|....:.
                                                     *  
tggtt----------------------gagtggctctggcattgagacagaaaTga
-----acgtatcttactgagtcttacg---a-a--------------a---gt ag
ct  c                     ccgc- -t actat gcc tt-tct g   
                                 a     g c a cc cac c   
© 1998-2024Centre National de la Recherche Scientifique logoInstitut national de la sante et de la recherche médicale logoUniversité de Lyon logoLegal notice