Dataset for CDS BID-like of organism Rhinolophus ferrumequinum

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
atggcg-tg---ctcaactg--cttgggctg---------------------------------taggaatt--------
---agcagctgcacgtgaaatg--gt-c---tggaggagatccccctggatgacgaggacccaa-----t-agaattcaa
ccc-aa c-   -g-c--g-atga--a-aac                                 cga t-g-        
    -t a     - -c -t   ca c   a                                 ac     g        
     - -                      t                                                 

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                       *                                                        
cactatgaagc------------Tctc----agc-a--tgcc--attcttatgtcaagagaagctgctagatc-------
----c--ggataaagtatgttgt tcttgtccctt-ctc-gggatc--c-cgccggg-t--g-----at-cg-accaaag
a tg-  ---g           g  ga     aac   - --at--ct-c----ac- -ct-  a g-g --g       
   cg     -                                 c      a a--t gtcc    tc-           
                                            g             c  t                  

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
ctgctgagaacaagaagtctatcccagagaggactggggatttggtcagcaaatgagtcatggacacaggtgtcctggcc
                                                                                
                                                                                
                                                                                

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
---------------------aacatctcccat-caccc--caaggagtcc---------------a--acaagaggtgg
ttgcagaaattctcaatccagcg-ggggttaccaac-attg-c------t-gactcagaagaggat-gc------t--a-
                     -cac-a------ --t--   - t  ac-a t  tcttg     ata t tttt-aa-c
                     g- -a-   t      g    g a   aa                c  c  g g  c t
                     t                                                       g a

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
cttcagaatttctgggcca-------------------------------------------------------------
--a--c----------t--agaagttttattaaaagttaaaactgaaattgaagaagagctaaaatccctggacaaagaa
gg-gg-ccagc   at-gg                             c  t t tc    tctc g             
 ac  t    g    aa c                                                             
          a                                                                     

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
atttctgaagccttcaccagccccggctttgtccgtgtgccttcttccgtgttgcgccctggtttcgcagagggctcggt
          g          a a   gaa a   gcaca  c  c a cccgca    caccaa c    aa    a  
                                                                                
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
---------------------------------------------------------------------------cctc-
cgaggagtggttgggtggtctggcgcgtggtgggcgggtgtgcggggcgctgtgggcgggtctacggggggcgttg---g
a  a  cgcccgc c cag g      c  a aaaaa g ccaca  aa g aaa a cca c  a acc  ag -tgt 
                                                                            gaa 
                                                                             c  

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
ggaagctgggggccg-gttc-a-ggag-------------------------------------------------g---
--g------ct----t----c-t----cgcgcatatcgggaatgtacactggagaccacagttcatgccagcggcg-gcg
c -tttctt--taacacagagtcatgtaaat                                            catac
a  ccagcca c   c   ta g acctct                                             t aga
   g   a   a          a      g                                             a c  

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
---g---ctggtgcctc---------------------------------------------------------------
catcagc-c-----a--tggttttgcctacaacaaatgcttttggagttgacaagacgtggtcaagaacctttgagtaca
atc-cttt-ccg a-gg  cc g t   c g                                    t  cgc  cct c
tgat   a aaa g                                                                  
  g                                                                             

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
---------------------------------------------------------------------ttc-gca--gt
ttgctgcagtttgtggtgtgacatatctggaggactatgcagcagagtcacatcattcagcaaggtggc-g-g---ct--
cg  g  t        gc  c tgtct    tac  g  agc    ag cgg   ag t  c  c  c a-gacg tg a
                                                                     g t        
                                                                                

       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
c------------tcggcaatggttcag--------------------------------------tc-tccggaatccc
-tttaatcttgag----ac---------gggcagtcaggggctgtacttcaggaagcagtaaaatcg-cc---c-g----
t     cgccag g c --gaccacgct                                      -a - tt-c-aagt
      g        a   t  aga  a                                       t   aatgt gag
                                                                                

       890       900       910       920       930       940       950       960
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
tgcagtag--a------------------tgcgaggttatccctg-ctaca---ag---cttg-tccccctgt-g----g
---t--gcattgcaatgacatttatatcc------tc--ga----tgg--tgag-cagc-c-ct--g------g-ctcc-
c g-ac-- g-c                 ccacca--gg--gtac --tt-   c- aat-a-cat-taga actt t c
    ta    ca                  agtgtc ctaga  t   c c       ga     g a t  gta    a
                              t                            g            ca      

       970       980       990      1000      1010      1020      1030      1040
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
a--a-ctgttg-aactgctggtccatgag---------------g--c-ccc----------------------------
-ca-a------g-----------------caacctttaccagtt-ct-t---agacggccagagctggcacacagaaagc
cgg ggg cgaacggatg tagtagactcatggtga    t catac cgtacccaa                       
t    ta   tc  t  t      c ag  gc gc       a  tg a a ga                          
                                                                                

      1050      1060      1070      1080      1090      1100      1110      1120
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
ctcccggtgtccctcgatgctgagtactgccgacagttggcatgtgttacagggtcttcacgggtactgccacggtgtcc
                gaca tc  cggtgaaga  aacctta aac         cc  tctaccgacaagaatgcaaa
                              t     gg   c                         g    g  ct   
                                                                                

      1130      1140      1150      1160      1170      1180      1190      1200
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
agcttggaccgcagtagggcttgtgagaataaagaggacatcattcctaattttgtcattctgcttgtggagatagaagg
  aaaaacgaa gcggta a gcaacagggcgc  cacacagtcgtag gcacg ctgggga  agaccc ctg     a
   c c      cac  t   aag      g g  ac     c aggc  g  c ag c t    c aat agc      
              a                                   a       a              a      

      1210      1220      1230      1240      1250      1260      1270      1280
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
gggagccgatggaccgagtgcaggatgccgccaatgcgctggtgcaccgcctgctggctgggttccacacaccactgcca
cat caactgca aaacaa gt acgcagta gta gatgtc  aggtc tacgcccactacc                 
    tg a        g         t a   cc   t   a     a  a   aat  c a                  
    a                     a          c                                          

      1290      1300      1310      1320      1330      1340      1350      1360
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
cggccttgctcgatgtatggggacctgtcagaggaatgctggcggttgcgcctcgcagcccagctgcatctgctcatgca
          g tgaaga  tat t tg  c  a  gaaa aaa ggcacaaagt t atgc t cgtcagt        
          a  ctgc   ctc    c                 ac      aa g  gtt   atca ac        
              c                               a                                 

      1370      1380      1390      1400      1410      1420      1430      1440
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
gacgttgtttatagacccttggatgaaggagaggtccaagctgatgttgttctcgttgctgttgccctggccgccgcggc
     gccgagggc aaaggcac   ctc  ca gaa c  accaagga caagccac cc gc aaga a c  a caa
     c gc  a   g          tca   t cg     c  g  ct      a                        
                                                                                

      1450      1460      1470      1480      1490      1500      1510      1520
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
ctaaaaggtggcccgtgatcccagcccggccatgcacgaaaacactgctgagtgaagaggagctgaacatcagccaaggg
tatgttcaac ag ca  cgagta gtttgat c                                      ctact at
   ccc  ga    a   g   c   acc  c                                        ag     a
        c                                                                a      

      1530      1540      1550      1560      1570      1580      1590      1600
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-----------------------------------------------------------agcagaagca-agctt--c--
ggtctttcgcagggccgtggcccggctgggaggaaccctagccggactcgctcccatat----------c-----gc-ga
cccg  ag gtcaag                                 act   gcaggttgttgtcgcg tgcccgt  
a  a   a  cttc                                   ag    g tc  a c  a  a a   ta   
                                                          a                 t   

      1610      1620      1630      1640      1650      1660      1670      1680
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------ccctg--t-cag--------a----g-ggttggg-aggtgtgctgg--
caaatatgatcaatgggaacagtgccatccgc-----cg-g---gcaagtcc-tagg-tt---c--a-aa-a------ct
                               ggag tga cagata    gt   ctcc-ccc-a tg--c-ccgccaac
                               aa   atc a   ag         t  g  a a      gcataat   
                                            c                         a  at     

      1690      1700      1710      1720      1730      1740      1750      1760
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-------------------c----g--g---------------------actga--------------------------
gtcgccattctcgctgttt-accc-tg-taaacttgaatttgcccctgg---a-gatcttcttcagaagctgctacaaga
t  tt g a    gaacgg tgtt ga    caag gccccaagaaaaaga -g                          
              g  cc   g  a      t   ct     t g  tct                             
                      a                           g                             

   
...
   
---
ttg
   
   
   
© 1998-2024Centre National de la Recherche Scientifique logoInstitut national de la sante et de la recherche médicale logoUniversité de Lyon logoLegal notice