Dataset for CDS BID-like of organism Laticauda laticaudata

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
atggcttctgc-aatccaagattatc---------------------aagttgccttatttcaaca--------------
--------c--a----a-----c-g-ttggccaacatggaagaaatc--------------a----aaacctgtgttgtc
   aacaa-tat c g-tgt c-t-t                     cgt  ttaggtaag-g      aaaac  a aa
     a         a     a                          c    g a    c                   

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-----------------------------------------------gc-----t------a-gaa--at--gca-t---
ttcagttttttggttgtcttgtcacaggaaaagcctcatgcacagcg--gtctg-ctactg-g---cc--ct---t-ctc
c    aga    aggc   a                  g a     catca    gggaaa a   at  gg   a    
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
        ** **                      *           *  * *       *               *   
------a-TAgAAa------------------g-aAacccagagtccAtgAaGaaagggaA--------------gAtgt
acaagc-g  c  taagagatcttggaaaaagttg tgaggataatg at t gttttat catcttgatgaagaa ata
     t t                         a                                         g  
                                                                                

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
**      **      * *                   * *   *    *     *****  *     *           
TGgaagctTT-gttctCtAct---------------g-C-TttcCtggaAagcttCTCCAgtAtttctT-ttg-------
  cccaaa  gcacta a gccaaggaagaagaagt-g t cga cacc catgc     aa gaaag ccaacaaaccc
  t    g   a a                       a             t  -            a  a         
                                                                                

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     *  * *  *                       *      *              *    *  * **   ** * *
-----CttCcA-tGcagag-g---ag-------c-taGtagaaaAagaaagctaaga-aAttaaAagAaCCtttTGtAaA
agaga ca a tc atttct-ctt--aagctca-cat gttggg gatctttcgtt-gc ccgc gc g  ccg  a t 
           aa     ag acc     aagg a   a             a    c  ag         aac  g   
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
 *     * *   ** *      *   *    *                  ***                          
tGcttttGgGgttCTtCttaccgAtggCagtaActtaggaggag------tAGAg-a--c---aagcag-a---cat---
g aagaa a aag  a agggaa g-c cacg acattcgctgatacaaag   -g-cg-agg------c-agt---gct
        t t c         t a        g    a a         c    t tc cta      g ctc   caa
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-g---atg----aa-----------------------------------------agctg-cca----------------
a-tgg---gagc--ggttttagtgcccctggtgattcttcagaagttcttggtag-----t---aacggggccaagaacc
t gcc   ccat                                                a                   
                                                                                

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     * *                                                                        
acataGtGc-----------------------------------------------------------------------
cgtcg a gacttctgaattttggagtgatctacctggaagattatgttgcagattacatcatccagcaaggtggatggg
   g                                                                            
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                *     * ** **   *    **                       ** ***    * * *   
-------------attG-gtttCtGAtGAggaAgattTCcg-----t-g-ag-gaaa-t-g-TGtAATcgttGaTgAagt
gaaccgtttttagtgg ttagg c  a  ctc acga  aagaaaa-a-g--c----t-g-c  g   aagg c a tca
                    ac a           c     tcgtt g c  a    c t t  a          c  tc
                                                                                

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
      *        **     *    *                                    *       *  *    
cagtgcT--------GAaattgAgcacCcatttgttgacaactt-ggc--------------tgAgtaattcAtgG-tgc
ggccaa cccaatgg  cgact catt t-ac-agga-----cca---caggtgagcccaccac accgccg ca taag
   att              a         -- ----     --                  -t      g  ac     
                                                                                

       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*   * *    **   *                                                       *       
AtcaTcTttgcAAtcaGatggt-----------------------------------------------caaCcagtatc
 aag g ggcg  gag ggaacggctcaaccagcaagccaatcccaccagttgggattgatggacttgattc gcactaa
 ct    c a                                                                  g   
                                                                                

       890       900       910       920       930       940       950       960
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
    *      *  * *  ** * *                                     **  *     **    * 
tgtgTgaggcaGtgAgAgcTGtCaTggc--------------------------------atGGaaGccagtAGatatGg
atgc ctacat cc t aa  g t acagagagcttgccagtttcattggggcccgagtcca  ct tatcc  caga c
   t a t    aa    t  c    tt                                 c         g        
                                                                                

       970       980       990      1000      1010      1020      1030      1040
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     **       *        *     *       **     * *    *   *                        
atcagGAagaagtgAtgatctt-GgctgcAatggtttTGgcgaaGaAagtaGtgaA------------------------
tagct  -a-cacc aatgagag aaa-a gacaagg  ttcgg t tcgg cct aacaactcttcaaattcagatatt
 g      -   a     aga            c  c    a          ga                          
                                                                                

      1050      1060      1070      1080      1090      1100      1110      1120
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
               *  *                  * * *                        ** *  ***     
--------------tGaaGaccttccattgtttcttcAcGaGt-------------------tctaCAtAccAGTgcttt
gtacatgttgaaaag tt tgacagaggacagggagg a t gcagcagtgtcagcagtgggctag  c aa   taaaa
                       c t  g c       g   a                   g g   g        c  
                                                                                

      1130      1140      1150      1160      1170      1180      1190      1200
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
             ***      ***               **   **  * *   **  *  *                 
---attgagttagCCAgaagctCCAc---c-tt-c-ga-gATgaaGTgaAgAgttTGaaAgcTg-attgattataggac-
aaagaa---ccta   tcgctc   gctg-a--g-t--aa  tgt  c- c agc  gg ct tagg------a-aa--t
     g   a  c      a      agt g  t g  g            ca         c a      -g--tt 
                                                                              g 

      1210      1220      1230      1240      1250      1260      1270      1280
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------ctgca-c----c-cactg--gt--acaa------------------at--c-t-aa-ct----ct--g-t-t
aagccctt-ca--c-tttg-c-----ag--tc----agaggggagcgtcgtgga--at-c-a--c--gaac--ct-a-g-
        g--t a caaa t     ca  ag    cc                  cc a g  t  tgtg  gg c t 
                                                                                

      1290      1300      1310      1320      1330      1340      1350      1360
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-ga--aaaat----gccagacaact----cccttaagtgcaaaggctt-cccgatggctgaaagc---------------
t--gt-----tcct----a------aact----c----ca----c--ac---c---c------aaatacagctaccagaa
g  ac     a   t tg-tt ta tcag    -gtc --   t-ag-ggtg-   -t  gct--               
                a   a              ga         a  aga                            

      1370      1380      1390      1400      1410      1420      1430      1440
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
gaagaagcaaaactaccgagagagagctattccgaagaaaagtctgctgatggagaggaaaaacccattcttttgccaga
                                                                                
                                                                                

      1450      1460      1470      1480      1490      1500      1510      1520
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
------------------------------------at------------------------gtgtagtg-ctga---ga
aggcaaatcccttctgctctatgggggggcagctgc-gtagctatcctggctgtcgcagtag--------c----cgac-
                                    t-                        tg g t t  a     -t
                                    c                          a a a a         g

      1530     
....:....|....:
          * *  
ctgaggaagaAgTaa
a--------- t gg
-ac a gttg c   
      ccac a   
© 1998-2024Centre National de la Recherche Scientifique logoInstitut national de la sante et de la recherche médicale logoUniversité de Lyon logoLegal notice