Dataset for CDS BAX-like of organism Calidris pygmaea

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
atggt---g-gtt--ggg-ttcctca-tcttt------------------------------------------------
-----gtt-g---cc---t-------g-----ttttttttttttcctctctctctctctctcttcttcttttccctcctc
    acgg ctac  accgac gcttcgtgg                                                 
     aaa a        a       a                                                     

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------gcaggaggggtgg-gg-ggg--t--gagag
ctccccggctccgctcgcttccttcccccgcgccgcgctccggggctgag-------------t--g---tt-tc-----
                                           ccag   c t c aaaaatag  c  tgccg c cca
                                                               c  a   aa c      

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
gccccccaccg-catg----------------------------------------------gctgat-t-ccca--a--
-----------g----gtttaactcctggtgacgtgcctgttccgcgccgggacgcggcaaa------g-t----gc-ga
cttt   gattcgtaccgcc      ccagc aacc    cg  c a                g tg c ggaac  ca 
           a    a                                                   a c         

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                 * *      *  *  
-------------gaccacagagatcca-g-------------------------tcat-gaagaAgTtgggg-CagGtc
gtctctctgcagt---------------g-gtgacccaccaagggcccacgggct----t--gct a gcactg ga gg
 g         aa gatt ctgacatagca                      a gcgggga  ac      a   c  c 
                            a                         a    a                    

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
       * *     **                *        * *               ** *            *  *
ctcgcagGaGctcttCTtcgaggtggccgttgtGa-tgttggCgGacggcaagtt---ctGGgGccgtgtcttctcCttC
tcacata g gaaac  gactacact--acgcg gtgcgaca c taaagttccccaata  t ---cccagcaga cg 
g             a  c ag   acag a  c c a c           gg      g   a  ta    c  a     
                                a                                      a        

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
* * *                                                                       * **
TtCtAttt----cgccagcaaactgg-g-tgaagtctctttgca-------ccccgag-tggtgaaga-c-atcatGgGC
 g g ccaggag--------------t-g---------------aacacat-------t---------t-g-ggcg a  
 a c a      a agt g g ga  g cg    ggc cac gc  a a     ac ag c   gg  c           
                          c a                             a         a           

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*                                                  *                   *    *  *
Tgggc--catggagttcctg-ggg-gcg-ctcctggcctggatc-aggat-Ac--tgaggatgggttcgt-CgcgtAgtT
 ttaatg-------------g---g---t---------------g-----g aatgcgtccgcacgagtat ttcg ta 
     a  cct g ag  a ct tcaa ggg     g atc   cgt c c     a c  ca  a  c   cgac c  
                    a   a   c               a     a                        a    

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*  *                     *    *            *     *                              
TggCagc-atcatg---------ctGcacaCcga--ggcggacGccgctGgctacttcctcactgtagccctgagcttct
 cc tctgcagtataacttcttgag atgt gataaaaacctt tgtga aggcaggggcgggaaggatttccgcgggtc
    ca    ac c  aac  cc c  cac   c     aacg   aa    c   c a   a       g  ca cag 
                        a                           a                       a   

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*                                                                               
Tta--ggaggcat-acctggggcc-ggtgata-----------------------gcctggccatgagctgc-accgg-c
 g-tt--------t----------tcaccggttcgctgctgtgctttggctgccgagggccattgctagg--t-----a-
 cgcgact c  cc agg a c ag   a  gg c     ag   g    aa     a     g  g   ttgtg aa g
   ac        a          a                                               c       

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
acgcca-cccaggc-tc-tccgc-ccatcgttggct-cctcgccgagttc-tcc-c-g---c--catcgccaagtggatg
------t-------t--g-----g------------g-------------g---t-g-ggc-tt----------------
ct gaccga g ctg gc tgaacg g  acgcaagc g gagg gagctc gag caaaagcg tcg tgcc aa c c
      a       a  a     a            a             a   c a     ac                

       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                    **          *               
-----g-agggagg-tgggt--------------gg-c--cac---atggatGGtgaatgttcaCccccctct-ctcttc
ttgtt-t-------g-----tgggtttttttggg--g-tt---tgg--c--g  acgtgacatt atga----t-ggcgt
gcccg cga  ct cg  tc              a agcgac gcc g cg     c c   g      gc cg a  c 
aaaaa a       a                       ac   aaa                           c    a 

       890       900       910       920       930       940       950       960
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                         *     *              **                                
ccc--------------cagc-tt-TggtggCtctcgggat-gttgGGgccattcatcgtatgaggc-------------
atgaggtggagcactggttcgaggg ttgtc cgctttctggcggt  taatggggattgggtgctattcttcgtcctgc
 a               gg       c c      gca   caa a     ca ac gaacccca               
                                                                                

       970    
....:....|....
           *  
--atctggaggTgg
tg-gtgctccc aa
  ccacaa  a   
     a        
© 1998-2024Centre National de la Recherche Scientifique logoInstitut national de la sante et de la recherche médicale logoUniversité de Lyon logoLegal notice