Dataset for CDS classical BH3-containing proteins of organism Oncorhynchus mykiss

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
atgccaagactgagttggcctcctgagctaaagcttggtacaaagattcagggtcaagcacatttgtgtaataatgttgt
                                                                                
                                                                                
                                                                                

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
cttcctctcctctctgcctcttttctttctcccctctctctctctccatccctcttcccccctctctctccatctctcgc
                                                                                
                                                                                
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------atggatg-----
ttcccctctctcatctcactgctttctcgtttctcctcctcactcgctcttcctccatagatgtcagc-------tgctg
                                                                       tccca a a
                                                                       atat     
                                                                                

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-------------------------------------------------------atgaagaggatgatgtgt-t-ga--
tttactatatcatacagcgagtctaagtgtcctcagaggatctttcctatggacc-ca--------------gt-c-tca
ccg ga a ga gcacagc tc    caccggat ctt   a a a a caa  g --cgcttaggtgca  -a  c-gc
  c              a               g  g                     t a c   cca    c      
                                                                                

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-----------------------------at--------gagtctgcC------cactca--------------------
atccagaaaccaagagggaaaaatgaacagcagcgtcct-t---cta-ggtggcggaggcgcctctggtgccgaaccgtc
taggta ttgagta       t g gcg -g      aa ccaa---         gaag     cc           a 
                       c     t-      g  -    c                                  
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                        *    *                                  
---------------------------------------gGgagcAcagactacccggaA-attcagctcga---tgact
tgacaacccccagttctgcgaatgggagcagcagtcacgt accg atcctgttagaatgttgca--tatc-ttacctga
              c a     g    c              gta  cag ag t c    g a t ----g atg c c
                                                      g t                       
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                    ***           *                                             
cgagtacgccgg-gatc---AGAccac--gaccaGgtctgc-----------cagt------------------------
gcgcgttca---gc---aga   aacgctccggt ccggtgacagacgtcgaggccgcccaacgccgttgtcccgcggtc
ta acgga ttaa-tag       tgata ta   ag aa             ttgaga                     
    a    g tt                 g    t  c                                         
                                                                                

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                      *                **    * *   *            
-------------t-gg-t-----------c-actccgAgtccaaggtg----cgCTcccgGgT--tGgcagag------
agagggataattt-t--t-gtaccacaagg-t----aa tgatcttccacaggac  gtga c atg cg-c-agatagg
       c cgacgccacg           gg  ag   cat   ct c    t     ac     a aaga -a c aa
             ca  a            ta                t                        t    c 
             a                 c                                         c      

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-ggacacagactactagt------------------------------------------------c------t--c---
acag-c----g-ttcctgctacgtaatgccctctttgtcctggcacactacagataaccatggcaa-gcaggc-tt-gct
t---a-    -c------                                        tccctagc aagtca ga taa
ct   g    a c gg c                                        g          t     c c  
 a                                                                              

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                             *     *                                            
-gcact--acagcatggctcgagc--ggtGGAgagCgg---g-gagatggg-----------------g-----------
t-----tcctg--gcaat-tctagagtta acagt atgcccgcgccccatgggcaggatcacgtgga-cgagggatcct
c     gt---ca---t- -a   gtacg   t c ca   tc c  gttacatag ccgg a catg accaaccc   
         gctgt  c       cc                a t   a          a    a      g   g    
                                                                                

       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                            *    *           **     * **       *
-ggatctttccGgggtcgaccaCaGtCtgctccgcctgcactgtGggcgGagaagagaattGGcCggcAgCTccggcgcA
ccctcggaat-aactcaactaggcacagcaggatgtgaatagca catt cagtctactac  ataca a  gaaaatg 
  aggac gga  aca  t gc   g aa c tc ga  cgaac  c a  c cactg     g  tg    t   ga  
   c  a       ag  g        c    ga     g  t                    t                
                                                                                

       890       900       910       920       930       940       950       960
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
*  * **  * **  *       *       *  *                                             
TggGaGAcgAgTTcgAcaactggCttgataaAggGgagcccaggagacagA-------aaagcccagg------------
 ca t  tc a  tt tccggaa acctccc ct tttaagcaacagggacggaacatttg-tg-tt-ttgcccagggaa
 t            c  gtac-t  g      ta  gcgttt cgtc tc   g tg gg-a--a--c            
              a    t                c         t           c-t gt g              
                                                           cc                   

       970       980       990      1000      1010      1020      1030      1040
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                  *         *     *                             
---------aGgaGgcacccaGcc-tg---agtcCtgctgatggTgctctTtcctctggagtcca--------aggg---
acctgcagctccttc-gagtgaaatgcccatcct ccagctacc tgggc agag-a----g-attcgctggatacaacc
           ag t  tag  gt aatgcgt a  ata cgta c ata  atcg-tc  - gcct a  t gc c   
                  ta  tg ct a c         gc t a         aga               c      
                                                                                

      1050      1060      1070      1080      1090
....:....|....:....|....:....|....:....|....:....|
                                               *  
aGacagaag------------------------------ggtggaagTga
gaggcccgacagaacatacccctatcatcccaccacgatccactgga ag
t   tatt-    ta  c t           g       -ag-a      
c     g c                              a- a       
                                                  
© 1998-2024Centre National de la Recherche Scientifique logoInstitut national de la sante et de la recherche médicale logoUniversité de Lyon logoLegal notice