Dataset for CDS herpesviridae of organism Epstein Barr virus

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
atggcctattcaacaagggagatactgttagccctgtgtatacgggacagtcgtgt------------------gcatgg
---aa---------ct--ccat-g--c-gga-t--cctc-cc-a--c-tcg---c-tatactattctgccacgcc---tt
   --tc       --  ---- -  - --- -t ---- -- -  - ---   -                   -   --
               g    t               a                                           

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                   ******* * *  
--aaatggtaccctgcat------------------------------------------------cCTGTGTTgGaGct
tatc--ata-g----a-gcccgtgagctggcctgacgagaccatgaggccagccaagtctacagatt       t t ag
  --  ---g-    - -       a                       a a     a        g            a
       c tt                                                                     

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
  *  *    **  *     ** *  * *     ** ** ** *   * *    *                         
agCagCaagaGAaaC--accTCtCcgCCT-ttCgCCaGAgGACActGTaGtTctGcgttatcatgtgttgcttgaggaga
ga cc ggtc  gg gtggg  g gc g cgcta  g  c  t aga g cgga tcc----------------------
    t        t     t  c ta a t              g                           c       
    a              a                                                            

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
 *  *     *  *****   *** *        **      *  *          ***      *    *  **** * 
tAatTgaacgAaaTTCAGaGaCATtTACagaaacTTggaaCaGatTtAtAAcacacACCgaaCa-Tgt-gGaCCTGGaTt
- gc acctc tg     gtc   g ttgcggtg  caccag ga gtggcag---   tgcatt tcca ct    - c
                                      g       c  g t      ct    a             
                                                                                

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
     **             *     * * * ***          *   *          ** ****   * *       
ttaacTCaGtatttTtAgagAtattTCaCcGtGGAgac---ccAAGCctTggGCGcGcGtTGGCCTGgAtGgCctgg---
c----  taccggcgcttca ggccn c t a   aggatagggg atg acata-aacc  a    ccg a agccgac
    t         n  n                  r      c           t               n n      
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                 *** * * *  *      *    *  *     *     **  *   *  *             
----------------tGCAtGcAtGcCTgaaggaCAttGTgtTGtaacCAGTcTACtcCttaCtaT-------------
atcgggggcaaagacac   c t c ga cctcat cgca cc tcgcg ctggc  aa gac ac acgactactggtc
g  a   a   n    g             t   g         c        a                          
                                            a                                   

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
          ****  ****        * * **** *  *   *  *   **** ***                     
-------gttGTGGacCTGTcagttcgtGgGaTGTTaGaaGccaGcgAaggCCTGGATGgt-------------------
gcggctcagg    tg    gctacaca t g    t cg tgc aa cta    a   accacaagagcgccgccttcg
                                                                                
                                                                                

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
        * * *   * **     *                 ****  *       *       *   ***  *  ***
-------tGgAtTCatCaACagggcG----------------gCTGGTcTaCattaaT-----tgAaGaCAAcATtcCTG
tgctgggg c a agc c  tacct gccctctatcgcagact    at gtgaggc gggcggc tac   gt cg   
                                         ac                                     
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
      *    **   *  *** * *   ** **  * ******      ***  *                        
gatccaGaagGTTtagCtgGACtTtGtttCTtGCtgGaCTGACTttgagtCTGttAgttatatgtagttatttatttatc
aga--c tcat  ccc gt   g g gcc  g  ca c      gacttc   aa ------------------------
 c a t    c    t          a    c                         g    c               
                                                                                

       730        
....:....|....:...
               ***
tccagaggaagacacTAA
---------tctttg   
                  
                  
© 1998-2024Centre National de la Recherche Scientifique logoInstitut national de la sante et de la recherche médicale logoUniversité de Lyon logoLegal notice