Dataset for CDS E1B19K of organism all

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
atgattaacg aggggacctttgtttgtttattcaaaggggattacctg   ggaggtataaagggagcggtggtgaggt
   gga gtt  tatc aa     cg                                        ccgt c c a tc 
             c                                                         g        
                                                                                

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
----------------------------ATGGa-----------------------------------------------
tgggggcattt           gacttc   a-                                               
   tta c gc              cca    g                                               
                         a                                                      
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-------------------------------ggtttggactatcttggaagacttta-caagac-cg-cg-ctgctagag
                               -------g-----c------------g------t--c--g-----g---
                               tccgcta-gggat- tccgagtcactaggctgtaa gaact tg -c a
                               ctacgac actgg  aag  ca  ggctcgcc g  ttta  at     
                                a a    ta c             c a t t c  a  t         

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-a-agctc-gacgga--ctccgggttttggagattctggtttgg--ct-ctctagctaggctagtgtacagagttaag-a
g-g-ct--t------ac---------------------------ta--c-----------------------------a-
attg--  aacgaagtgt  ttaccgcaa   gcatctt gc catgcgactagtgccacg ga cagtccgaca  agg
c ct g  g  a  tgt   aatt  g      agga c  g  cg aa g  ta a  tt tc tctg a   c   ct
t       c     c                                gt a  c     a   t ag       g   t 

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
ggattataaggaggaatttgaaaagcttttggc-gactgtcctgg-cttttt---gattctctgaatctgggccaccagt
------c--------------------------c-----c-----a------   ------------t------------
a  cc -cgctgacgg   tctggta ac taaatctaa-tga acg gc a    cag at tg c- tt t  t gcg
   g  ggcaacc        gc ct g  atttatggcggag  ga a  c    tg     a  g  c  a     aa
   a   tttct            a     c ggc   t   c  t     g     c           a        t 

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
c-cttttccaggaaaaggt--tcaaaa-ctt-gatttttccac-cc-gggcgcactgctgc---tgctgttgctttt-tg
-t-----------g-----tc------gt--a-----------t--a--------------   -------------g--
tctacc ta ac - gaa cacacccgc-c tacc   a ttgct t  ca agtgatat    ctggcca  c  ctct
 gg g   g c    ttc at gtggtta  g        g  a  g  t  t  ctgg     a  ca g  a   c c
 a  a   t          gg t   ca            a     c  a  g  a  c     g  a         a  

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
g-------------ttttat-ttggataaatggAgcca---g---gAaACcC-AtcTgagcagGGgcTACattcTGGAtT
-c            ------a-------------ttgccagc   cgctgt   at ctcggattag  tccgt    c-
at            ccacc ggat  ccg     a-ag   a   a g  g   c  a  ttc   a   gac-    a 
tg            gac g ta a          - -        t        g      c    t    g        
              a   t  c                                                          

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
tcatagCcatgcatcTGTGGAGggCctgGa---tgaggc------gga--------aG------agaaTcttcaacTaCT
atgcgagagcagcct a----aaatagtcg   acgctaagcgggacc        gtggacag-cgg-tgcgggt-g--
g-c ct gc  tgg       --t-ga-tc    acta gcaacata-         catgagtg--c --gattgct  
- t     t    a         - tc --     tac      c--g          c     ca   g a---- -  
  -                      --                                            -  c     

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
ggctt--------------------------------g------taCaGcctccgg---------------------c-g
tttcg                                c      cgac --cg-ac                     -c-
c gga                                a      gt g  gatt--                     gaa
-                                           a  t   g-a a                     agt
                                                   -   t                     ttc

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
gtcc--------g---gg-ctc------c--tg---cg-cg-ga------------------------------------
-cag        -   aattat      g  gt   --g-tacc                                    
taga        t   --g-gg      -  aa   aataact-                                    
c-tt        a   ccaaca      t  -c   t cg-t-t                                    
 g--        c   tt  --         c-     at  ag                                    

       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-----------------------------------------g---c------------------------------a---
                                         taca-a   gtagcaaca            gcagc-ccg
                                         ccattc   accc tc                 aacgaa
                                         -tgggt   ta   cg                  g agc
                                         ag  ag    g    t                     tt

       890       900       910       920       930       940       950       960
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
------------ca-------------tg-c---cagg-gga-----------aga---------ga-------------
gcagccgg   c--cgc          aa -atctgta -cg   gagga   gct         ac             
aactaaat   agg             -- tgat---- t--   cc cg   t-g         -g             
cgt tt a   tac             cc g g acac ctt      tt   - -         c-             
tt     c                      a    tct  a            c c                        

       970       980       990      1000      1010      1020      1030      1040
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------ag---gaGgaggagaaggac-gagaAcC--
                                                  tc   ag-ccacccctcccg tgc--t-  
                                                  g-   c-c------ggaa-a c--gc-a  
                                                  -a   -  at att---- - aca  g   
                                                             tg        -        

      1050      1060      1070      1080      1090      1100      1110      1120
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
---------cGaGagcCGGcCTGGACCCTCcg---gc-------------------------------------------
         t---gag---t-----t-----a   ttggaagag gagctggattgaatcaggtagctgacctgt     
         - c -t-ga -a  a -a aga-   --atggat  tt taca   a   g a  gt cagat a      
           g  -tt  gg        tg    aa         c g            t   c              
                                   c                                            

      1130      1140      1150      1160      1170      1180      1190      1200
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
atccagagctt   agcagggtgctgacaaccatt            acggaccagtggacgggccaggggagtgaagag
tc  t  a  g   caacaca tt t  ttggtcc            ga attggcca ggacaat aa  ca t   c 
c                     c  a  cgttgaa            c     t     t   t g     g  a     
                            g aa g             t                                

      1210      1220      1230      1240      1250      1260      1270      1280
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
ggagaggagcgatggtggc   aataccgggatgatgaccgagctgactgtcagcctaatgaatcgcaagcgtcctgagc
   ac  gatcc acg ag   gcc  aaattcaggatgta tt ag gtcag tt g   tgca acgc  c ta  aa
        cat  ta   t        t c gatcct  gc       a  t          c   t ca  a      t
         g        a            c c     a           g              g             

      1290      1300      1310      1320      1330      1340      1350      1360
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
gcattacctggcatgagctacagaaggagtgcagggatgaggttggcctgatgcaggataaatatggcctggagcagata
ctg gtgg ttt cc  g ta  cgca agtagcta g gaaaatcaaaat  gc c g  g  ctcaa a  a  ac t
 ac a  t     g   a c   gtt  t  t aa      t gaatg cc     t c        tt t      g g
                 t g     a               c c tg  t                 g            

      1370      1380      1390      1400      1410      1420      1430      1440
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
aaaacccattggttgaacccagaggaggattgggaggaggccattaagaaatatgccaagatagccctgcgcccagattg
 cg  ttgc   c ag g  ttgt  t    tt  a ta  t  a gagtt t   t  ag gt tt ta g  t   aa
  c  a         c a     c              t          cg     a        a  a  t        
                                                                                

      1450      1460      1470      1480      1490      1500      1510      1520
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
caagtacaggattaccaagacggtgaatatcagacatgcctgctacatctcagggaacggggcagaggtggtcatcgata
ac a  t aag g gt gacaca t     tcaga atgagct  t  aatg  a  t  a  t ta  taaag a    
t       t   c       tt  a              t        t  t  t        c        g  t    
                    ga                                                     g    

      1530      1540      1550      1560      1570      1580      1590      1600
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
c cctggacaaggcagcctttaggtgttgcatgatgggaatgagaccaggagtgatggatatgaatgccatgatctttat
  agaa  t gattc tta c  a  ca t   caaaat   t gg c  g  tg cagct  g atgag agcac cg 
  t c       a g                           g c  g  t  ac t        c  g  c  ta    
  g           t                                t                       t        

      1610      1620      1630      1640      1650      1660      1670      1680
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
gaacatgaagtttaatggagagaagtttaatggggtggtgttcatggccaacacccacatgaccctgcatggttgcagct
a  tg t g   cgga  gcctggt a  gc  cactc a  tc    t  t gta gc tgttt a  c  cgtttat 
      a       cg  c  c           t  aa t   g             t     ag          ag   
      c           t              a                       a                      

      1690      1700      1710      1720      1730      1740      1750      1760
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
tttttggctttaacaatatgtgtgtagaggtctggggcgctgttaaggtcaggggatgtaagttttatggctgctggatg
 ccacaag  c  t  c cc  cacc  atct   actcaatcctgtacgc    t  cggt  c  ctca  t    at
       t           t     g  t        ga g  agc   t     c    cc        g         
                                     a  c        a     g                        

      1770      1780      1790      1800      1810      1820      1830      1840
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
ggcgtggtcggaagacccaagagcgagatgtctgtgaagaagtgtgtgtttgagaaatgctacctgggcgtctttactga
 caacatcat tc ggtg  a  tcgatct  aa a  ac a  ca a  cc a gg  tactt t caa accgtac  
  g     g  c  ca        at g     c t         c c            gt      t  gag gta  
        t                  c                 t                      g  t    g   

      1850      1860      1870      1880      1890      1900      1910      1920
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
gggcaatgctagagtgagacactgcgcttccacggagacgggctgcttcttcctggtgaagggcacagcctctatgaagc
a  tg at acaga cc c  taatttgg tcta  atgt ct  t  tagtt aa a  aa agat  taggg t    
   g  c  c     a           a   t c  t a   a      g g   t t     t tg   gtcc c    
               t           c        c                    c             a t a    

      1930      1940      1950      1960      1970      1980      1990      2000
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
ataatatggtgtggggctgcacggatgagc      gcatgtaccacatgctgacctgcgcctctggggtctgccatatc
    cg  a caat  acattgca g  ca       gcct cta gt  g c  t  ttatggg  acata ta ccct
          t  c  ggc   t               g c     a     a  a     g aa  ca          g
          a  a  ta    a                                         c               

      2010      2020      2030      2040      2050      2060      2070      2080
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
ctgaagaccatccatgtggcctcccacccccgcaagaagtggccagtgtttgagcataacgtgctgatcaagtgccacat
t tgct atg g  ca cattaga  tgaaa ac agca     ttca     aa c  tc aa t cgcgc  tactg 
     a     t     t  gg t   t t  g   cgc       at     t      a ct a  t      t  t 
     c           a                                                              

      2090      2100      2110      2120      2130      2140      2150      2160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
gcacctgggtgccagaaggggcatgttcctgccgtaccagtgcaactttagtcagaccaagctgctgttggagcccgatg
   taca  aagtc cc a  agcc  taaa  t     a  t  ta g ac  tgtg  ag aa cc t  aaaa  ga
    t    c ag  g     g           c            c       c  t   a tt          t  a 
    g    g t   t     t                                   a                      

      2170      2180      2190      2200      2210      2220      2230      2240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
ccttctccagggtgaacctga   acggcatctttgaca                                         
gga ta t aaa a gtt a    ca  ag g     t                                          
t   g                    t  g                                                   
                         g                                                      

      2250      2260      2270      2280      2290      2300      2310      2320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
                                                                                
                                                                                
                                                                                
                                                                                

      2330      2340      2350      2360      2370      2380      2390      2400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
        tgaatgtctaggtgtgcaagatcctgagatacgatg   agaccaagtccagggtgcgcgcttgcgagtgcg
          gcca gccac a ag  ag ta a  g  t       cctatcgac gc ttgca ac a     a  t 
          t    ta  a c  t     g  c              t  g  ca a  c  t  g  c          
                g                               a        t                      

      2410      2420      2430      2440      2450      2460      2470      2480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
ggggcaaacataccaggatccagccg                          gtggccctggatgtgaccgaggagctga
 a  t gg  cgtt  atag  a  a                             tgtg aa    a  t  a  c   c
 c  g  t   c g   c    c  t                             atg           g     t    
 t                       c                                           a          

      2490      2500      2510      2520      2530      2540      2550      2560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
gacccgaccacctg              g                                     tgatggcctgcacc
 ga a  t  tt t              a                                      tc tt tc tctt
    g                                                               t          g
                                                                                

      2570      2580      2590      2600      2610      2620      2630      2640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
----------------------------------------------------------gga-ga-g--------------
gggacc                                      gagttcggctccagt--a--g-              
c ag g                                        c ataat  t  - gg  a               
  c  t                                              a     c  t                  
     a                                                                          

      2650      2660      2670   
....:....|....:....|....:....|...
                                 
-------a-----cg------------gAtTaa
       -g   aaa            atg-gg
        c   ctt            t-c - 
        a   g--            -ca   
        t   tg               -   
© 1998-2024Centre National de la Recherche Scientifique logoInstitut national de la sante et de la recherche médicale logoUniversité de Lyon logoLegal notice