Dataset for CDS E1B19K of organism all

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
atgattaacg aggggaactttgtttgtttattcaaaggggattacctg   ggaggtataaagggagcggtggtgaggt
   gga gtt  tatc        cg                                       cccgt c c a tc 
             c                                                         g        
                                                                                

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
----------------------------ATGgag----------------------------------------------
tgggggcatttc           acttc   ---                                              
   tta c gcg             cca   agt                                              
                         a                                                      
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------gtttggactatcttggaagacttta-caagac-cg-cg-ctgctagag
                          atggat------g-----c------------g------t--c--g-----g---
                                ccgcta-gggat- tccgagtcactaggctgtaa gaact tgc-c a
                                t cgac actgg  aag  ca  ggctcgcc g  ttta  at     
                                a aa   ta c   c         cta t t c  a  t         

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-a-agctc-gacgga---------------------------ctccgggttttggagattctggtttgg--ct-ctctag
g-g-ct--t------                         ac---------------------------ta--c------
attg-- gaacgaag                         tgt  ttaccgcaa c gcatctt gc catgcgactagt
c ct g  g  a  t                         gt   aatt  g      agga c  g  cg aa g  ta
t       c     c                                                a        gt a  c 

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
ctaggctagtgtacaga-------gttaag-aggattataaggagga---atttgaaaagcttttggc-gactgtcctgg
-------------t---       ------a----------------   ------------------c-----c-----
gacacg ga cag-ccg       aca  agga  cc ccgctgacg   g   tctggta ac taaatctaa-tga a
 c  tt  c tctg a          c   ct   g  ggcaacc           gc ct g  atttatggc gag  
    a   t ag              g   t    a   t tct               a     c ggc   t   c  

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-cttt---------------------------------------------tt---gattctctgaatctgggccaccagt
a--g-                                             --   ------------t------------
cg -c                                              a    tag at tg c- tt t  t  cg
ga a                                               c    cg     a  g  c  a     aa
t                                                  g     c           a        t 

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
c-cttttccagga-------------------------------------------------------------------
-t-----------                                                                   
tctacc ta ac                                                                    
 gg g   t c                                                                     
 a  a   g                                                                       

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
------------------------------------------aaaggt--tcaa-a-ctt-gatttttccac-cc-gggc
                                          g-----tc----a-gt--t-----------c--a----
                                          - gaa cacacccgc-c aacc   a ttgtt t  ca
                                            tt  at gtggtt   g        g  a  g  t 
                                                gg t    a            a     c  a 

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
gcactgctgc---tgctgttgctttt-tgg-------------ttttat--tggataaatgGAgcc---ag---gA----
----------   -------------g---c            ------at------------ttgacagc   cg    
 ag gatat    ctggcca  c  ctctat            caacc ggat  ccg     a-a   ca   a     
 t  c  g     a  ca g  a   c ctg            gcc g ta a          - -   -          
 g  a  c     g  a         a                a   t  c                             

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------aACcC-AtcTgagcagGG
                                                              ctgt  gat ctcgga  
                                                              g  g   c  a  ttc  
                                                                     g      c   
                                                                                

       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
---------gcTACattcTGGAtTtcatagCcatgcatcTGTGG--AGggCatgGatgaggca------gaaG-------
         ag  tccgt a  c-atgcgagagcagcct a---  caaatcgtcgacgctaggcggggccgtggacaga
          a   gac       --c ct gc    a        ---t-ga--c acta  ca cata--catgagtg
          t               t     t    g           - tc t-  tac      c -g  c      
                          -                        --                           

       890       900       910       920       930       940       950       960
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-a-----------------------------------aTcttgaacTACTggcttgtaCaG-cc-ccg-g--gg---tcg
gg           tgagga                gag tgccggt-g--tttcgccg c  t-tg-a cgc-cgtacac
cc           gaca                  cg   -gatt- t  c  gaagt t   gatt- -cgat   ggt
 -                                 a     a---  -  -        g    g-at taat-   ata
                                         -                           at c    ---

       970       980       990      1000      1010      1020      1030      1040
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
g---gg--t--------t--ccggcg-gag---c----------------------------------------------
c   aaga-cttc    a  gaaa--ac--gat-c   tt                   cgtagctaca           
t   --  aa cg    g  ttttatc-ccagata   gc                   aacc  ac             
a   cc  gt  t    -  ---cta ttatcgat   ag                    ca    g             
-   tt  cg          ag -g   gtc c g    a                     g    t             

      1050      1060      1070      1080      1090      1100      1110      1120
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
---------------------acat-g-----------------ca-gggga------g--g------agaag-------
 gcagcaaccgaaaccgg   c--a acc           catctg ta-cg      aagca   gcgact-       
    agccagcctgaaat   -gg- -             ggat-- --t--      -c -g   agt-ggc       
     a ggaag ctt a    acc c             t g ac acctt      t  tt   t - --a       
        tt t tg  c                      a    t ct a       c         c           

      1130      1140      1150      1160      1170      1180      1190      1200
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------gaGgaggagaagg-acga------
                                                        ag-ccacccctcc cgtg      
                                                        c- -----tggaa -a--      
                                                        -t at tt-----  -cc      
                                                               g  c     a       

      1210      1220      1230      1240      1250      1260      1270      1280
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
---------gAAcC-----------cGaGg-gcCGGcCTGG----ACCCTCc---ggc----------------------
         c--t-           t---a ag---t----    -t-----   attggaagag gagctggattgaat
         -gc-a           - c - --g a-a  a     -a caa   ---atggat  tt taca   a   
         a  g                  ttt  gg           atg    aa         c g          
                                                  g     c                       

      1290      1300      1310      1320      1330      1340      1350      1360
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
caggtagctgacctgtatccagagcttagcagggtgctgacaaccattaacgaccagtggacgggccaggggagtgaaga
g a  gt cagat a tc  t  a  gcaacaca tt t  ttggtccg gattggcca ggacaat aaa caat  ac
  t   c         c                  c  a  cgttgaac     t     t   t g     g  a    
                                         g aa g t                               

      1370      1380      1390      1400      1410      1420      1430      1440
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
gggagaggagcgatggtggc   aataccgggatgatgaccgagctgactgtcagcctaatgaatcgcaagcgtcctgag
    ac  gatcc acg ag   gccg a attcaggatgta tt ag gtca  tt g   tgca tcgc  c  a  a
         cat  ta   t        t   gatcct  gc       a  t          c   a ca  a      
          g        a            c c     a           g              g            

      1450      1460      1470      1480      1490      1500      1510      1520
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
cgcattacctggcatgagctacagaaggagtgcagggatgaggttggcctgatgcaggataaatatggcctggagcagat
actg gtgg ttt cc  g ta  cgca agtagcta   gaaaatcaaaat  gc c g  g  ctcaa a  a  ac 
t ac a  t     g   a c   gtt  t  t aa      t gaatg tc     t c        tt t      g 
                  t g     a               c   tg  c                 g           

      1530      1540      1550      1560      1570      1580      1590      1600
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
aaaaacccattggttgaacccagaggaggattgggaggaggccattaagaaatatgccaagatagccctgcgcccagatt
t cg  ttgc   c ag g  ttgt  t    tt  a ta  t  a gagtt t   t  ag gt tt ta g  t   a
g  c  a         c a     c              t          cg     a        a  a  t       
                                                                                

      1610      1620      1630      1640      1650      1660      1670      1680
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
gcaagtacaggattaccaagacggtgaatatcagacatgcctgctacatctcagggaacggggcagaggtggtcatcgat
aac a  t aag g gt gacaca t     tcaga atga ct  t  aatg  a  t  a  t ta  taaag a   
 t       t   c       tt  a              t        t  t  t        c        g  t   
                     ga                                                         

      1690      1700      1710      1720      1730      1740      1750      1760
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
accctggacaaggcagcctttaggtgttgcatgatgggaatgagaccaggagtgatggatatgaatgccatgatctttat
  agaa  t gattc tta c  a  ca t   caaaat   t gg c  g  tg cagct  g atgag agcac cg 
  t c       a g                           g c  g  t  ac t        c  g  c  ta    
  g           t                                t                       t        

      1770      1780      1790      1800      1810      1820      1830      1840
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
gaacatgaagtttaatggagagaagtttaatggggtggtgttcatggccaacacccacatgaccctgcatggttgtagct
a  tg t g   cgga  gcctggt a  gc  cactc a  tc    t  t gta gc t ttt a  c  cgtctat 
      a       cg  c  c           t  aa t   g             a     ag          ag   
      c                          a                       t                      

      1850      1860      1870      1880      1890      1900      1910      1920
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
tttttggctttaacaatatgtgtgtagaggtctggggcgctgttaaggtcaggggatgtaagttttatggctgctggatg
 ccacaag  c  t  c cc  cacc  atct   actcaatcctgtacgc    t  cggt  c  ctca  t    at
       t           t     g  t        ga g  agc   t     c    cc        g         
                                     a  c        a     g                        

      1930      1940      1950      1960      1970      1980      1990      2000
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
ggcgtggtcggaagacccaagagcgagatgtctgtgaagaagtgtgtgtttgagaaatgctacctgggcgtctttactga
 caacatcat tc ggtg  a  tcgatct  aa a  ac a  ca a  cc a gg  tactt t caa accgtac  
  g     g  c  ca        at g     c t         c c            gt      t  gag gta  
        t                  c                 t                      g  t        

      2010      2020      2030      2040      2050      2060      2070      2080
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
gggcaatgctagagtgagacactgcgcttccacggagacgggctgcttcttcctggtgaagggcacagcctctatgaagc
a  tg at ac ga cc c  taatttgg tcta  atgt ct  t  tagtt aa a  aa agat  taggg t    
   g  c  c     a           a   t c  t a   a      g g   t t     t tg   gtcc c    
               t           c        c                                  a t a    

      2090      2100      2110      2120      2130      2140      2150      2160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
ataatatggtgtggggctgcacggatgagcgcatgtaccacatgctgacctgcgcctctggggtctgccatatcctgaag
    cg  a caat  acattgca g  ca gcct cta gt    c  t  ttatggg  acata ta ccctt tgct
          t  c  ggc   t         g c     a     a  a     g aa  ca          g     a
          a  a  ta    a                                   c                    c

      2170      2180      2190      2200      2210      2220      2230      2240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
aacatccatgtggcctcccacccccgcaagaagtggccagtgtttgagcataacgtgctgatcaagtgccacatgcacct
 ctg g  ca cattaga  tgaaa a  agca     ttca     aa c  tc aa t cgcgc  tactg    tac
     t     t  gg t   t t  g   cgc        t     t      a ct a  t      t  t     t 
           a                                                                  g 

      2250      2260      2270      2280      2290      2300      2310      2320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
gggtgccagaaggggcatgttccagccgtaccagtgcaactttagtcagaccaagctgctgttggagaccgatgccttct
a  cagtc cc a  agcc  tata  t     a  t  ta g ac  tgtg  ag aa  c t  acaa  gagga t 
   a ag  g     g                        c       c  t   a tt          t    t   g 
   g t   t     t                                   a                            

      2330      2340      2350      2360      2370      2380      2390      2400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
ccagggtgaacctgaacggcatctttgacatgaatgtctaggtgtgcaagatcctgagatacgat   gagaccaagtcc
 t aaa a gtt a ca  ag g     t   gcca gccac a ag  ag ta a  g  t        ctatcgac g
                t  g            t    tg  a c        g                 t  g  ca a
                g                     a                               a        t

      2410      2420      2430      2440      2450      2460      2470      2480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
agggtgcgcgcttgcgagtgcgggggcagacataccaggatccagccggtggccctggatgtgaccgaggagctgagacc
c  tgca ac a     a  t  a  t ag  cgtt  atag  a  a   tgtg aa    a  t  a  c   c ga 
     t     c           c  g  t                 t   atg           g     t        
                       t                       c                 a              

      2490      2500      2510      2520      2530      2540      2550      2560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
---------------------------------------------gg--ga-ga----------------------gcgg
cgaccacctggtgatggcctgcaccgggaccgagttcggctccag--ag--g--                     gaaaa
a  t  tt  a tc tt tc tcttc ag g  c ataat  t  t ga  a                       ccttt
g            t          g  c  t        a     c tt                          a-g--
                              a                                            tt-  

     
....:
     
AtTaa
tg-gg
-c - 
ca   
 -   
© 1998-2023Centre National de la Recherche Scientifique logoInstitut national de la sante et de la recherche médicale logoUniversité de Lyon logoLegal notice