Dataset for CDS BID-like of organism Danio rerio

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
***                                                                             
ATGgctgcca-ctggctcctccaccacattgc--------------tc-c-----gagacc--g----t-a--c-cagc-
   aactttta-a--gg-t-tg------g---ctgaaggatccgtt--a-tctat------aa-tatgac-tc-t----t
     acagg t-ctaat-c--c  ttt-cc   ccttt      cg tga ctgc   tg  ca gc-g ga g gtg 
       ga  a  a--  ag         a                     a c                   c     
                    a                                                           

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
---------------------------------------------------------------------------t-gaa
acctcagcctgccctcgccatcaagatcaagaccctcacatgcggctgagggagagagccattctacacaggaag-g--c
ggt  t      gaagt tt  ct cgt  t  t   g  g tt   cct      c a c ggg g ata g  gttc-
                                                                            a  t
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------aaacatca-cctgtacaaatatattgaatttaaaaggaagaagctgaaagagga-aattgcagcgtctcttt
agagagcgttt--g-tg-tg-aggtccctgcg-ttcaaggccgta-g-cttgccg--att-tg---g-gtagcgg-t---
        --- c-g-  -ct----------c -c---a------ - -c-aa--  --- g    c ag-a-a- -   
                  g-a t      c -  -   -          - --        -    - -- - -      
                                                                                

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
gcatgacgggatta-----gatctgca-----------------------------------------------------
cgtgatgtt-tagttaaccttg-aa--cacatccccagtgttcagtccagccaatccagagagctcgatagaggacagtc
-a------a --c-     -g- --                                                       
 -      -   -       -                                                           
                                                                                

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-------------------------------------------------------------------tatgag-ag--ac
tggcagtattgggggaccgcgtctctcgggacctggacacacacctgttttccgccactaatacgctgcgc-tc--tg--
                                                                   a--- -a  aa  
                                                                   -            
                                                                                

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-tg-a-tt--aa---t----a-ca--ag--gac---g---cc-ctca----c-ag--g-----a--aaagtg-cagtgc-
t--a-c--cg--tgc-tcag-g--gc--tg---gag-ttt--t----cgct-a--ga-gatgg-gc------t------c
a  g a  aa  att    a t  aa  aa   tga acc  g    tcaa c  cc tgcta aa  gtc gtg  aa 
                                                                        a       
                                                                                

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-----------------------------------------------------tg-ag-gacagaaagc---acc-tg-a
tttagtattgttacaagccctgcaggccaagggtcaatcgctagaagctctgc--g--t--t-ctttc-gac---c--g-
                                                      ccgccttgt-c--agatt gtt  a 
                                                       a  a  -  - g-            
                                                                   t            

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
gaa-ca-ag-c-g-c--c-tca--c---------c-----g-atgg------------gca----------ca--gtt-a
---t--g--t-t-c-gg-a---tt-tgaaaagcg-tgggc-a----cacccgtctgca---gaacatccag--ga---t-
 ttga cctg a attt  ct gc ac c   acaacaaatgca a           g               ctaggc 
   c     c            ca           c cc                                       a 
                                                                                

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-cc-g-a----ag-ggag---------------------------------------------------g----------
c--a-g-aaac--a----gatcttggcgttctcttctctgcgtctggtgaggaggtttacatcctgtca-gtgaacaggc
gg t a tgca ac  t   aacgc    gacaacag c a gacaaga c  cagcg   aaaa    tc         
     t                                                                t         
                                                                                

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
------------------------------g---------------ag-ag---a--agc----t--cagagg-at-tta
ctcagatcagctcagccctcctgcttcact-gtgactctcggagaa--a--aag-ac---tcac-gt-gacttg-gagac
                             gccaa aaa aa  a c at ttga catttatca agt---c-tcc a--
                                c                       g      t c     -   - -  
                                                                           a    

       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
atccagtgtcgtttaagagagacgagtctcgtgcacagcaccctacaatgcag---------------------------
taaatccag-tccgtccga-c-acttctatagcat-tagtgagggtggatgtccctgtagacttctagagtctggcccgc
g-------- aa-c--a--t- ------------g ---g--ac-ac------  aaa a ag aa c  a a ca a a
-     a a --a-g -          g  c   - c  -  -- -- c                               
           g    t                                                               

       890       900       910       920       930       940       950       960
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
---------------------------------------------------------------catga------tgatga
gcttgatgagtggcgttggctgaggagcagagcgtgcattcctcctctcattctgccgtattttc--tggagcg-ctatt
   ga g                           a a caaac a  ga cc  ca ac g g--a g       ----c
                                                                   -         ga-
                                                                                

       970       980       990      1000      1010      1020      1030      1040
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
agct-----------ga----ctgga---a--tg-a---a-ac---g-a-g-a--agag-t-c--ag---a-c--a----
t-tcaatgcagaaga--actt-----cgg-ac--g-gaa-a--gca-t-t-a-gg----a-c-cg--tta-a-gt-ttcc
g -ag   agatg    gacgggct aaatgt  cccg ggt agt gcgc taag  cc g ac   gtcgtcaccg a
-  -              gg      gc      a        t   a     tt                  tg     
   g                                                                            

      1050      1060      1070      1080      1090      1100      1110      1120
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
----------gca---a-ag-gaa--------tggctgcggtacaacagctagcagag-t--tcgct-cacaaggggatc
tttttcctgt---gtt-g--a---tgagaatggc---attagtgg-gtagcg-ttt--a-gcctagat--gtt-cactgg
gcg c aa g   ccggac ctg c  cgcacaa a -----c-- a---a- agc ct aa-----g  ac- a---c-
              ac           a    --        -a  -   -  ---       gc  a  --c -   - 
                                                                                

      1130      1140      1150      1160      1170      1180      1190      1200
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
ttctagatcagaa------gattaaagagaaccctagcctgccttcaacactgacg-cctcctcc-at----catcattc
ccgcga-ggcagtcgttct-tcgctt-ctgttgagttt-ctaggaatcat-ctcgttgtct-caat-ccagtgtgtgggt
--a--- a----g       g-a--g -c-c----cc-t-------c--c ----ac---- ---g at cc-------g
a -    -    -       - -  -  - - ata--g      g - t-    a-       t a -        c  -
                                                                   g            

      1210      1220      1230      1240      1250      1260      1270      1280
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
gcgaagcttctggaca-g-----c--t---g----tagatcctcacgtccctcc--c-------agccgga-aatcagt-
cactcatcggacttacc-tctgt-cg-gca-agggggcggg-ag-a--ta-gttgc-atgtggc---atctactagcaac
--ag---aaa--c---ttca  c aacc tactcta-a-c- -- -  -- -g-ag tg        ---cc-g----- 
  --  g---  - g         t  a     t - -c-t    t      - t   c           - g-      
                                     t                                          

      1290      1300      1310      1320      1330      1340      1350      1360
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--ttaagca------------tatggcc-tcacctttg-gagcctccagactgttcg-t-actgc-caccggag------
accacg-agggagcttgtggagg-tc-atg-t-gaggatact-gagttccagcg-tcc-g-ac-aaac--tattcaaccc
  ---- -c            -- -- -a-g-ta--c- --- a--ac-----a -- ccc--t- --t ----      
  a  t  -            c     tc    -  -      -  -- t   -  t  a          a         
                                                     c                          

      1370      1380      1390      1400      1410      1420      1430      1440
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-----------at--t-t-a--gtttgtgctgaacgtttc----------ct---ggagagctttgcacct---------
tggagcaagac--cc-t-g-ga-ga-ca-t-tgggcccaacgcccactactggcacccc-ttggcag-g--tggactccg
        ctg  tgcc c c c--ga- - ----a----          a-   ---- ---c---c- accc a a c
        t       a   a  c  -        -  gg          -         aa - c  a           
                                   t                           a                

      1450      1460      1470      1480      1490      1500      1510      1520
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
----------g----g-aga--ca---ca--------------------------------------a-atg-c-gtgc-
gagtcctggg-ggtt-c---aa--tgt--ctattacaagccgagtccgccgagctccccgtgctgct-t---g-g----t
a    a  ca aagg g   c   ctgaggagcc                                 cg   aaaaa tg
            tca           c     ag                                  a           
                                                                                

      1530      1540      1550      1560      1570      1580
....:....|....:....|....:....|....:....|....:....|....:....|
                                                            
--c-----------------------------------tctaatctggag-tagaattga
gc-catgtggccgtcgctgcagtgttggccttcggaag---ttct-ccgagactg-g-ag
ataatgc                             gc  acg--aa--- --c- c - 
   g                                 a   --ag -    gt-c -   
                                                            
© 1998-2024Centre National de la Recherche Scientifique logoInstitut national de la sante et de la recherche médicale logoUniversité de Lyon logoLegal notice