Dataset for CDS BID-like of organism Capra hircus
[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]
10 20 30 40 50 60 70 80 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| atggcgggctc--gaagagctg-ggctccgggaggacatgct--------gagg-------gtccttgctg--------- ------ac---cg---c-----g------a---------t--gtatctcct---ggacgct--tg-a----acttagaca c ttgc--tgt ac g-cctcatctga tttcgtttgtg-tcaa atgaacttc ca--a-tag g ctat t aatta c ca ta a a ca g-a ac c aa g -cct gg cctc g g t a a a 90 100 110 120 130 140 150 160 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| -----------------------------------------------------------------------------cct gcttggggttcctattcctggagttctatgagtcgcaacaccccttcttcctgaaaggggttcagcacgcctctgtt--- ag t atc taacact a a taagctgc gaa gg ttgatggg ca act gaata a t g a g g c c a a a 170 180 190 200 210 220 230 240 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| tcct---------------------------------------------------------------------------- ----ctcagcgaagcacctccgagaacaaggaggttttnttnanngttnnnnntnnnnnnnnnnnnttnnnnnnnnnntn gat tgcgactaag at cg cg cga gannnnnannanaannnaaaacngaa anngaagaagagcnc c a t tc t t g c n acaatggg gc gagg 250 260 270 280 290 300 310 320 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| -------------------------------------------------------------------------------- nnntnnntnnnnnnnnnnntttntnnnnnntttnnnnnnnnnnnnttngnctgtccctgctccctgcccgtgctcagcct aaancccnggacaaagaaannncngaagccnnngccagcacaggcnncnanc cta acac cctggcc tca c ccagcag g g 330 340 350 360 370 380 390 400 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| -------------------------------------------------------------------------------- cccggccccggagggcgcggcgggggggtgcctggcgcacggtcggggccgcgggcgacgtctgtgccagggaggcgcct gg taaa a gcacatgc tc aacacg cttcgcg cgt a a aacc gt cgg ccgtgcaagcagtt a c a tc tt t a aa g a ca a 410 420 430 440 450 460 470 480 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| -------------------------------------------------------------------------------- ggtcgtgggcttgcggcggctgggcgagctggccagtgaaagcacgtgaggcttttcnnnnnnnnnnnnnnnnnnnnnnn caa g c ca a ac ctaacc g c accg cctaggtagc tnanann t ga c gt acgcat gngng a 490 500 510 520 530 540 550 560 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| -------------------------------------------------------------------------------- nnnnnnnnnngggcgtgtgccctgtgggccacggcntcgctgccgtccagccgcctcgcactgcnnnnnnnnnnnnnnnn ccnaactcanancngacnntnnattcgnnn nn nnnnnnan n nnn gncannn ng a a c g a a a 570 580 590 600 610 620 630 640 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| -------------------------------------------------------------------------------- nnnnnnnnnnnnnnnatgccagcggctggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnn 650 660 670 680 690 700 710 720 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ---------------------------------------------------------------g-c-tgg-ct------- nnncccgtgcgctacgtcgcgcttacgttcatccgctgccctcttccttgcaggttagcaatg-c-c---c--cggggac agcanac gttngctngnan gngggntgatngt atgcaagaaat at t ag nnnn nn nnnannn n n n nnn gnnn g cc c a n 730 740 750 760 770 780 790 800 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| -------------------------------------------------------------------------------- gagcgcaccacaagcctgctgctgcttggcgcgctgctgcagttcggcgtgaccttcctggaggaccacgcggccgagta tga a a g g a ga c g 810 820 830 840 850 860 870 880 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| * * ------------------------------------tAGGgggcgtGaggCtgtggggt-tCccattccga--gcaccca catcttcctgcagagctgccccaactcctgcttccagct cacgtgtgccagccataccca gagggttctcccgggagc a a g tg tgggg a gt ta c c taa t c at aatc tg ac g-- a--ctg g cc g a tc at 890 900 910 920 930 940 950 960 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| --ggagccc--------tgcc------------------------------------gaggaggagcagacagact---- gatattg-aataaacctcaa-aagaaaaagccctcttggaggaccctctttggggtaccc---ct-gcagag---gtgat ----- - ---g --a g a- ------ctt- a g t - -g tttc t 970 980 990 1000 1010 1020 1030 1040 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ----------tccagagC-cGC-----------Cttcg-a-agatgtgtcccctgc-tccctggggggaggag-c-ttc- gtggccatcagaatcca-ta--agctacttctc-gcgcgcgcacgcccatagaatgaggaacatcac-g----g-g---c c------t - a g a a a-t- g -c-a-at-gg----- -a-ga----tt-t gacgcgcag -tgc g - - t t- - -- -- g ct c- -- at-cc a a t - g a aat 1050 1060 1070 1080 1090 1100 1110 1120 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| -cc-------cgagt-ccccc-c------------------------------------------------ggcctgggt g-gcgtccttt--agt-g-ataggcagctcgcccagattggggacaggcagttactgtacttcagaacacaa-g-at-c- c - - g-- g-a-- -c cgga a gaccccct g -t-a-aaag g a t a t aa c t -t- a a 1130 1140 1150 1160 1170 1180 1190 1200 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ----gc-gctcccgccct-gcgatggttgagagcctg----------------------------gc-cctgcga-ccca ccct--aa-at-g---tggagt----cgtcc------agctggcacacggagagcctgccggtgt-ag-tcagtcctt-- t g c-t--g-cga-a --ccgct--c-- aaa a- g-ac---t--gg a g a gg- t - aa a - t c a-- c gagt t t g a 1210 1220 1230 1240 1250 1260 1270 1280 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| gag---------------------------------ttggat-----------gcagtg-----------ctggccgagg -tttcaggagcctgtcgcagtggaccccgaggaggacacttgcttggatagca--cc--gcctgtcagtggc-a-gc-cc -cctg c aag aaa t---c-- c --g --a-t--g-- g- a act-ca t gt tgc gaa at c ga a aat a 1290 1300 1310 1320 1330 1340 1350 1360 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| cgctggaacagctgatc------caa----acctgagct-ccgcacctagacc--------------------------- g----a-------cg-gcctggc-gcgagc-a-a-cca-cg-cg--g-g-tg-ggaggcttcacgtccaaagaggttctg -tggt-tgtctta--ct tg ga--cgcgc-a-t---g -t--tg-c-t--aatca gaggt a t cc ctc ac t a a ag tca- at a t c a aa gt c a g c 1370 1380 1390 1400 1410 1420 1430 1440 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| -------------------------------------------------------------------------------- gaattacagggtcccgcaccgcagtctggagctgaaagcacagagaaggtggacgatgaggggcccagctggctcttgag atggct cnnnntntaangannnnnnnnnnnnnnnnnntnncannnnannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn ca cn nnn nt n nn n c n 1450 1460 1470 1480 1490 1500 1510 1520 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| -------------------------------------------------------------------------------- tctgcagcgcatcaagcgacaagccagcaggggattcntacgatcatggcggtgccctcccaccccagaaccagactgaa nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 1530 1540 1550 1560 1570 1580 1590 1600 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| -------------------------------------------------------------a-gag--gac--a------ gcccaccaaatgctgcgaaaactggtggccttgctggaagaggaggcagaagtcatcaacc-c---aa---cc-ggatcc nangnnnnnnnaanagccngnantnntnagcnnnnnanntnttcnnggnngcagtnggnaaggannttngatgcanncaa nan nn nnnn n n n n nnn n n nnn nn nnnnn nn nnnan cn ntgann nnn n n nnn c ggg g 1610 1620 1630 1640 1650 1660 1670 1680 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ---------------------------------------------c--c-g--c--a-ta--c-t-t--ccaa------- agttttgctggcctgcttcctggctgggttctcctctcctgcctt-tc-t-cc-tt-c--tg-t-t-gg----gggacgt c cggaaa cggaa g a agc cc a agacag tttg aggcc cccgcggagcagctctttta ga g gc c ga a a ga c a gc g c a ct g 1690 1700 1710 1720 1730 1740 1750 1760 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| ---------------aagagag-c---------------------a-c-ctcgcca-c-t-g-tc--ag-cgt--tc--g ggatacccggggaga-------c-caaagctcagggctttaaagg-g-a-------g-g-t-c--at--c---ct--gc- ac tcctccctc tg gt gt aactt tcc tc cctc caataaactacactgg cgtaagaagcct ac c a agt t g ta g aac g g c tgga ta c t a 1770 1780 1790 1800 1810 1820 1830 1840 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| gaccacggtgaccttcc-ca-----------------------------------------------------------g c--a--c--c-------c--gaacaccagaacctcctcgccctcgagcgggaggggcccccctgtgaggaacttagtcc- -gg-tt-ac-catcatat gtgt cg t gcgggtt gaa cg gcaatcccg g ga tg g ta g g c c c 1850 1860 1870 1880 1890 1900 1910 1920 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| -ag-g-tgctggg----gg-g----------------------------------------------------------- c--t-c--a----ctgt--g-gacgagcatgctggccttggtctccctcccccacccgccccctccctgagtgctggggt agcgt ga-gccctatgttttcca ttg ac catacaa ggg g gc a g ga ct ga ag c accc gtt a actc aagcac ac g gc g at g aa a c 1930 1940 1950 1960 1970 1980 1990 2000 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| --------------------gcatg--gg-a-a--ttc-cgccctggatccag--cca-gg-ggctgggagggcatcctg cctcactgcggacaagtcggt----ta--a-g-gc---t--------------gc---c-cg----ca--ctagt-tt-- g gc a g aa-acacctactgcgtggggggagaaccatgg ctttggctt-ctcag--tc-----g--nt tta t acct ata c g ac aca t g ttctgca t a ac an n cc g c g a n g 2010 2020 2030 2040 2050 2060 2070 2080 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| gcacttt-----------------------------cac----------------------------------------- ag-g--cnnnnnnnnnnnnnnnnnnnattgtcgttg---ctgtgtgtattgggggtggggtggggggacggggatttgaa --g-gg- tgtac g gg gt nnnnnan t g a ng 2090 2100 2110 2120 2130 2140 2150 2160 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| --tac--------------------------------------------------------------------------- ct-ggccttcctttcaggcatcacgggaccccgcttccaccgtttgtccgttctgtgtttattgagcacctactgtacac aga-- ta 2170 2180 2190 2200 2210 2220 2230 2240 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| -------------------------------------------------------------------------------- caggcactgtcttgataactgcagatgccctatgcagctttaaccactctggtatacacaaaaagttatgtcagaaacaa 2250 2260 2270 2280 2290 2300 2310 2320 ....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....| -------------------------------------------------------c--cgtggacTg------------- atttcctcatctgtaaaggcaggagaactcttaatacctacctcaaagggttatt-atatgctct-aagctctccctcag g ------- - a taaaaga t gc 2330 ....:....|....:.. ----------------A aagttgctgtaagatcg |