Dataset for CDS classical BH3-containing proteins of organism Urocitellus parryii

[Download (right click)] [Download Frequencies (right click)] [Sequences] [Alignment]

        10        20        30        40        50        60        70        80
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
ATGtcccag--cc-ag--------g--a----------------------------------------------------
---gtaggaat--c--tgtagttt-ta-acaataccgcccagtgagcaggggactcctccggcgcccggcagagtgcgca
   cg-a--  gaaccc gctgag ggc          g g  ctc g t  c               ca   a ca   
   --t-ct  a ggag cgc    ac             c   c                                   
   a  t c                                                                       

        90       100       110       120       130       140       150       160
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
gctgccgccggcgctgccagcggctcccgcctcccgcctcccgcctcccgccagagcccgctgctttccccctccttccc
  c   c  a  cac                                        a                        
                                                                                
                                                                                

       170       180       190       200       210       220       230       240
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
--------------------------------------------------------------------------------
aatcgcgtctgggcgccttgctcccgtgttcatcacggtggaccctttggggtagccttggcatcacgactcggaggctg
    aaa         aaa  c  aa           c    aa  ggcacag   ac                      
                                                                                
                                                                                

       250       260       270       280       290       300       310       320
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
---------------------------------------ctc-------g---------------------ttccagCct
ggactctctggtggtttttcccagaggagatggagccggag-tgtgtgt-gaggagctggaagatgatgtg--g--c-tc
aa     aacca  gggggtg                 c--aac    a tgt  caga    g  gacaac - t- -a
              a  ca                    t        c                          c  g-
                                                                               g

       330       340       350       360       370       380       390       400
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                        *                                                       
gaagagagggcgcctgggccccagCctgggagcc--tcctc------------------tc------------tggc---
ccgagtg--cgt-gccc-at-agc tccccgcgtctgggggcccttcagcctgggcctcgatgctgacttgtt----cag
-gc--a-cc-a-g-a-ac--g--  gr t-ct gtaatactt tggtc a a att cga-c   attcccgga c gtc
t--cc-c   -a  - -  ga     g a       ca  ag g  g  t    cg   -gg     g    a  a   a
 t            g t         a              a             a   c                    

       410       420       430       440       450       460       470       480
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-gcca-c---------c-c-ca-caggct-c-g----------ctctgccc--c-gccc--tgccg-ggtcct-------
a----g-tggactgcc-c-t--g------t-a-ggcccgccgc--------tc-c----ac-c---t--ga-acgggtca
tcggta aa g   at aacggc t c cg g cc   t ttg ctgt tgggtaag  ggg- tcac c-t-       
g    c             g  t      a c            g ca g a  tta  t     tg  -tg        
                   a                                              c             

       490       500       510       520       530       540       550       560
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
-----------------gggcttccacctaccagccag---g-c-gggccac--agaccc--agccccgcc---tcccca
ccagcagcggcaggcaa-cagca-g-g-g---------gac-c-aa------tg------tc----ga---gtgaggt-g
                 c-----g-t-a-c  ctggtta a atg-tctttggcg ttgaggtttg--catc c----t-
                 tt  gctag  at  n  tg       c caa   a    a    gca tta     g aggc
                 a                  c       t                                a  

       570       580       590       600       610       620       630       640
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
cgccacggtg-tgatggtgccttgtggagtGactgaagagccgca-ccgactctttt-acggccatg-c--gCt------
ac---g----c-c-c-c--ttgg---a--g-ctg-g---c-ac--tg-c--c-g-ccctta-ga--ccatga-gcccgcc
--gtg-tcgt a-g-t-ct----aga-tca --cc-tccag--tc -a-ct-a-g-- ---ca-gct -ac- a      
ta  c caac gttgc aca cc c cg -   a  g t-tgt t  g ggg  c g ggt - c -  c t -      
gt      c   ac             c     -    g     g      a    a                       

       650       660       670       680       690       700       710       720
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
------acCggcgacccctcc-tgcca---------gtttccctgcagg-------c----a--gc-g--cc------ct
gagcagca-cc-ttgtt----c---t-ggccttcaacccgtagctgt--gttgtcc-ttgg-ga--g-cc-tctgaagg-
      -t --gac---gc gtat -ca  gcc cga-g--ttg--cttccaacgg accc t   a gag- g  g -a
      g- tta--tgg    g c            -gaa ---ct-    g                   a        
                                    ta-                                         

       730       740       750       760       770       780       790       800
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                 *     *                        
cagtgacaacc-----------g----gag-t---gat-g---gcgagCTgcggaGcaTtgcagAcgagtTcaacc-gc-
-c-gtgggg-atggagacattc-agca---g-aca---c-cccaaa-a- caact gtggagc--tc-ac-tg-g-t--t
g- c-----g-a cc cag gg cc g ccagctg   t gag-tct-  t  ac ac c  -c --g-- -cc-tgcta
   -c     g                   tc g       g tg-        k       g  ga tg a- tgc  g
                              c            c-                       c           

       810       820       830       840       850       860       870       880
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:....|
                                                                                
t-a----c-g--g----------aacattagcagcccgaagac----------------cgtgtgtgga-g----ag-tc
-c-tatg-g-cg-ctactttaag--a-cc-c--aaa-cgga-tcgcgggcacagcgtcg-agccccaatg-ttgc--c--
gt ccca a aa ggctaggttagt-c--c-tc---t----c-     tgc tc tg ct-ca-----caag cattact
   gga       act  a gg  g  ggt gtt tg  cc g                 ca- t tc- t   t  tag
                                g                            -            g     

       890       900       910       920       930       940       950       
....:....|....:....|....:....|....:....|....:....|....:....|....:....|....:..
                                                                          *  
ctgctcttcctGctcc---------tgctGggcttg-a----g--gaggacagggcccgg-gcgggg-ccccagTga
-acgcggagac-ggtaatccagtccacg--cct-gaa-tggt-atc-tag--cc-attc-tct-cctgattagc ag
a---ata -t- -ag-         --tc --acc-gtcacatgg-g--- t--t----tgaaa-acatagttt   
  t  n   -   --            -    - - tc   g  c  ac  gatctaa aa   tt  g a c    
  a      g   ca                     c              c   g                     
© 1998-2024Centre National de la Recherche Scientifique logoInstitut national de la sante et de la recherche médicale logoUniversité de Lyon logoLegal notice